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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870881.1_cds_XP_016434268.1_30341
CDS Infomation

[gene=LOC107760691] [db_xref=GeneID:107760691] [protein=metal transporter Nramp5-like] [protein_id=XP_016434268.1] [location=complement(join(137145..137474,137584..137679,137765..137896,137986..138090,138186..138359,138432..138501,138569..138750,139964..140073,140443..140547,140649..140727,140816..140856,141014..141092,141174..141287))] [gbkey=CDS]
Sequence

ATGGAGAATAACCAACAAAACCAAGTCAATGGAGGAAGCAAGAGAATTGTAGCAGTAGCT
GAGAGTCCACTACCTTCTTCCACAAATCCTAATAATGATTATCACGAGCCCCAGAAACAT
GGCTGGAAAAATTTCTTTGCATACGTGGGACCTGGTTTCCTTGTTTCCTTGGCATATCTT
GATCCAGGAAATTTGGAAACTGATTTGCAAGCAGGAGCAAACCATGGATATGAGCTTCTT
TGGGTGATTCTCATTGGATTGATATTTGCTCTTATTATTCAATCACTTGCTGCTAATCTT
GGAGTAAGCACTGGCAAACATTTATCAGAATTATGCAGGGCTGAATACCCAGTATTTGTT
AAGTACTGTCTATGGATTCTAGCTGAGGTTGCTGTCATAGCTGCAGATATTCCTGAAGTG
ATTGGGACAGCTTTTGCTCTTAATATATTGTTCCATATTCCTGTTTGGGTTGGAGTTCTT
TGCACTGGTGTGAGTACTCTCCTCTTCATTGGCCTGCAGAGATATGGGGTGAGAAAGCTA
GAATTGCTAATAGCAGTGCTAGTATTCGTAATGGCAGCGTGCTTCTTCGGGGAAATGAGT
TATGTGAAACCTCCTGCTAAGGAAGTCCTCAAAGGAATGTTCATTCCTAAGCTTAATGGC
AATGGCGCCACTGCTGATGCTATTGCCTTGTTGGGTGCTCTCGTCATGCCGCACAACCTC
TTTCTTCACTCAGCCCTTGTGCTCTCTAGGAAAATACCACACTCAGTTCGTGGCATTAAT
GATGCATGTAAATACTTCTTGATAGAGAGTGGATTTGCACTCTTTGTAGCCTTCCTAATC
AATGTGGCAGTTATCTCTGTGTCTGGTACTGTTTGCGGAGCTGACAATCTCTCTCAAGAG
AATAAAGATAGTTGCAGTGATATCACTTTGAACTCTGCTTCTTTTCTTCTCAAGAATGTA
CTTGGAAAATCAAGTTCTACGGTTTATGCCATTGCCTTATTAGCCTCGGGACAAAGCTCT
ACCATTACTGGTACTTATGCTGGCCAATTTATCATGCAAGGATTCTTGGATCTTAAGATG
AAGACATGGTTAAGGAATTTGGTTACTAGGCTTATTGCTATTACTCCAAGCCTCGTTGTT
TCAATTATTGGAGGATCATCTGGAGCTGGCAGGCTAATCATTATTGCTTCAATGATCCTT
TCTTTTGAACTTCCATTTGCTCTCATTCCACTGCTCAAATTCAGTAGCAGTTCCACCAAG
TTAGGACCACACAAGAACTCAATTTATATTATCGTGATCTCGTGGATACTTGGGCTAGGG
ATCATCGGCATCAATATCTACTACCTCACCACAGCTTTTGTAGATTGGCTAATACACAAC
AATTTGCCTAAAGTTGGAAATGTGTTCATTGGGATCGTAGTATTTCCGTTGATGGCTATC
TATATTCTGTCAGTGATTTACCTTATGTTTCGAAAAGACACTGTTGTCACCTACATTGAC
CCAATTAAGGACAATCCAAATGCTCAACGCTATATGGAAGATGGAATAAACAATATGGAA
TTGGTAGATCGTGTTCCTTATAGAGAGGATCTTGCTGATATCCCACTTCCACAATAA

Peptide Sequence

PEP ID

XP_016434268.1
PEP Infomation

PREDICTED: metal transporter Nramp5-like [Nicotiana tabacum]
Sequence

MENNQQNQVNGGSKRIVAVAESPLPSSTNPNNDYHEPQKHGWKNFFAYVGPGFLVSLAYL
DPGNLETDLQAGANHGYELLWVILIGLIFALIIQSLAANLGVSTGKHLSELCRAEYPVFV
KYCLWILAEVAVIAADIPEVIGTAFALNILFHIPVWVGVLCTGVSTLLFIGLQRYGVRKL
ELLIAVLVFVMAACFFGEMSYVKPPAKEVLKGMFIPKLNGNGATADAIALLGALVMPHNL
FLHSALVLSRKIPHSVRGINDACKYFLIESGFALFVAFLINVAVISVSGTVCGADNLSQE
NKDSCSDITLNSASFLLKNVLGKSSSTVYAIALLASGQSSTITGTYAGQFIMQGFLDLKM
KTWLRNLVTRLIAITPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTK
LGPHKNSIYIIVISWILGLGIIGINIYYLTTAFVDWLIHNNLPKVGNVFIGIVVFPLMAI
YILSVIYLMFRKDTVVTYIDPIKDNPNAQRYMEDGINNMELVDRVPYREDLADIPLPQ

Transcript Sequence

Gene sequence data has not been registered.